1.

Exploring relationship between hypercholesterolemia and instability of atherosclerotic plaque - an approach based on a matrix population model / Mateusz Twardawa (WIiT), Kaja Gutowska (WIiT), Piotr Formanowicz (WIiT) // Journal of Bioinformatics and Computational Biology - 2024, vol. 22, no. 6, p. 2450029-1-2450029-18

Scientific article 40

2.

Searching for significant reactions and subprocesses in models of biological systems based on Petri nets / Kaja Gutowska (WIiT), Piotr Formanowicz (WIiT) // Computers in Biology and Medicine - 2024, vol. 168, p. 107729-1-107729-10

Scientific article 100

3.

On anti-occurrence of subsets of transitions in Petri net-based models of complex biological systems / Kaja Gutowska (WIiT), Piotr Formanowicz (WIiT) // BioSystems - 2022, vol. 222, p. 104793-1-104793-13

Scientific article 70

4.

Interrelations between Iron and Vitamin A - Studied Using Systems Approach / Kaja Gutowska (WIiT), Dorota Formanowicz, Piotr Formanowicz (WIiT) // International Journal of Molecular Sciences - 2022, vol. 23, iss. 3, p. 1189-1-1189-18

Scientific article 140

5.

Learning vector quantization as an interpretable classifier for the detection of SARS-CoV-2 types based on their RNA sequences / Marika Kaden, Katrin Sophie Bohnsack, Mirko Weber, Mateusz Kudła (WIiT), Kaja Gutowska (WIiT), Jacek Błażewicz (WIiT), Thomas Villmann // Neural Computing and Applications - 2022, vol. 34, iss. 1, p. 67-78

Scientific article 100

6.

Petri nets and ODEs as complementary methods for comprehensive analysis on an example of the ATM–p53–NF–κB signaling pathways / Kaja Gutowska (WIiT), Daria Kogut, Małgorzata Kardyńska, Piotr Formanowicz (WIiT), Jarosław Śmieja, Krzysztof Puszyński // Scientific Reports - 2022, vol. 12, p. 1135-1-1135-13

Scientific article 140

7.

Wybrane podejścia do analizy modeli złożonych systemów biologicznych opartych o klasyczne sieci Petriego / Kaja Gutowska (WIiT), Piotr Formanowicz (WIiT) // W: Automatyzacja procesów dyskretnych : teoria i zastosowania. T. 2 / red. Andrzej Świerniak, Jolanta Krystek - Gliwice, Polska : Wydawnictwo Politechniki Śląskiej, 2022 - p. 53-60

Chapter in monograph 20

8.

ABG Assistant - Towards an Understanding of Complex Acid-Base Disorders / Łukasz Gutowski, Kaja Gutowska (WIiT), Alicja Brożek, Marcin Nowicki, Dorota Formanowicz // Journal of Clinical Medicine - 2021, vol. 10, iss. 7, p. 1516-1-1516-17

Scientific article 140

9.

The Crosstalk Between SARS-CoV-2 Infection and the RAA System in Essential Hypertension - Analyses Using Systems Approach / Dorota Formanowicz, Kaja Gutowska (WIiT), Bartłomiej Szawulak (WIiT), Piotr Formanowicz (WIiT) // International Journal of Molecular Sciences - 2021, vol. 22, iss. 19, p. 10518-1-10518-27

Scientific article 140

10.

Searching for the Origins of Life – Detecting RNA Life Signatures Using Learning Vector Quantization / Thomas Villmann, Marika Kaden, Szymon Wąsik, Mateusz Kudła (WIiT), Kaja Gutowska (WIiT), Andrea Villmann, Jacek Błażewicz (WIiT) // W: Advances in Self-Organizing Maps, Learning Vector Quantization, Clustering and Data Visualization : Proceedings of the 13th International Workshop, WSOM+ 2019, Barcelona, Spain, June 26-28, 2019 / red. Alfredo Vellido - Cham, Switzerland : Springer International Publishing, 2020 - p. 324-333

Chapter in monograph / paper 20

11.

Systems Approach Based on Petri Nets as a Method for Modeling and Analysis of Complex Biological Systems Presented on the Example of Atherosclerosis Development Process / Kaja Gutowska (WIiT), Dorota Formanowicz, Piotr Formanowicz (WIiT) // W: Advanced, Contemporary Control : Proceedings of KKA 2020 - The 20th Polish Control Conference, Łódź, Poland, 2020 / red. Andrzej Bartoszewicz, Jacek Kabziński, Janusz Kacprzyk - Cham, Switzerland : Springer International Publishing, 2020 - p. 579-586

Chapter in monograph / paper 20

12.

Virxicon: a lexicon of viral sequences / Mateusz Kudla (WIiT), Kaja Gutowska (WIiT), Jarosław Synak (WIiT), Mirko Weber, Katrin Sophie Bohnsack, Piotr Łukasiak (WIiT), Thomas Villmann, Jacek Błażewicz, Marta Szachniuk (WIiT) // Bioinformatics - 2020, vol. 36, iss. 22-23, p. 5507-5513

Scientific article 200

13.

Petri nets and ODE as complementary tools in analysis of signaling pathways / Daria Kogut, Kaja Gutowska (WI), Aleksandra Poterała-Hejmo, Jarosław Śmieja, Dorota Formanowicz, Piotr Formanowicz (WI) // W: Proceedings of 11th International Conference on Bioinformatics and Computational Biology / red. Oliver Eulenstein, Hisham Al-Mubaid, Qin Ding - [Manchester], United Kingdom : EasyChair, 2019 - p. 150-160

Chapter in monograph / paper 5

14.

Selected Aspects of Tobacco-Induced Prothrombotic State, Inflammation and Oxidative Stress: Modeled and Analyzed Using Petri Nets / Kaja Gutowska (WI), Dorota Formanowicz, Piotr Formanowicz (WI) // Interdisciplinary Sciences: Computational Life Sciences - 2019, vol. 11, iss. 3, p. 373-386

Scientific article 40

15.

Systems Approach to Study Associations between OxLDL and Abdominal Aortic Aneurysms / Łukasz Gutowski, Kaja Gutowska (WI), Maria Pioruńska-Stolzmann, Piotr Formanowicz (WI), Dorota Formanowicz // International Journal of Molecular Sciences - 2019, vol. 20, iss. 16, p. 3909-1-3909-16

Scientific article 140

16.

Algorytm przeszukiwania tabu dla problemu znajdowania podzbiorów kluczowych tranzycji w modelach biologicznych opartych na sieciach Petriego / Kaja Gutowska (WI), Piotr Formanowicz // W: Automatyzacja procesów dyskretnych : teoria i zastosowania. Tom 2 / red. Andrzej Świerniak, Jolanta Krystek - Gliwice, Polska : Wydawnictwo Politechniki Śląskiej, 2018 - p. 67-74

Chapter in monograph 20

17.

Theoretical Studies on the Engagement of Interleukin 18 in the Immuno-Inflammatory Processes Underlying Atherosclerosis / Dorota Formanowicz, Kaja Gutowska (WI), Piotr Formanowicz (WI) // International Journal of Molecular Sciences - 2018, vol. 19, iss. 11, p. 3476-1-3476-31

Scientific article 30

18.

The effect of cigarette smoking on endothelial damage and atherosclerosis development – modeled and analyzed using Petri nets / Kaja Chmielewska (WI), Dorota Formanowicz, Piotr Formanowicz (WI) // Archives of Control Sciences - 2017, vol. 27, no. 2, p. 211-228

Scientific article 15