1.

Differences in the intraspecies copy number variation of Arabidopsis thaliana conserved and nonconserved miRNA genes / Anna Samelak-Czajka, Paweł Wojciechowski (WIiT), Malgorzata Marszalek-Zenczak, Marek Figlerowicz, Agnieszka Zmienko // Functional and Integrative Genomics - 2023, vol. 23, iss. 2, p. 120-1-120-16

Scientific article 100.0 2.9

2.

Analysis of Arabidopsis non-reference accessions reveals high diversity of metabolic gene clusters and discovers new candidate cluster members / Malgorzata Marszalek-Zenczak, Anastasiia Satyr, Paweł Wojciechowski (WIiT), Michal Zenczak, Paula Sobieszczanska, Krzysztof Brzezinski, Tatiana Iefimenko, Marek Figlerowicz, Agnieszka Zmienko // Frontiers in Plant Science - 2023, vol. 14, p. 1104303-1-1104303-16

Scientific article 140.0 5.6

3.

Genome-scale de novo assembly using ALGA / Sylwester Swat (WIiT), Artur Laskowski (WIiT), Jan Badura (WIiT), Wojciech Frohmberg (WIiT), Paweł Wojciechowski, Aleksandra Świercz (WIiT), Marta Kasprzak (WIiT), Jacek Błażewicz (WIiT) // Bioinformatics - 2021, vol. 37, iss. 12, p. 1644-1651

Scientific article 200.0 6.931

4.

The correctness of large scale analysis of genomic data / Paweł Wojciechowski (WIiT), Karol Krause (WIiT), Piotr Łukasiak (WIiT), Jacek Błażewicz (WIiT) // Foundations of Computing and Decision Sciences - 2021, vol. 46, no. 4, p. 423-436

Scientific article 40.0

5.

Transcript-Level Dysregulation of BCL2 Family Genes in Acute Myeloblastic Leukemia / Luiza Handschuh, Paweł Wojciechowski (WIiT), Maciej Kazmierczak, Krzysztof Lewandowski // Cancers - 2021, vol. 13, iss. 13, p. 3175-1-3175-23

Scientific article 140.0 6.575

6.

AthCNV: A Map of DNA Copy Number Variations in the Arabidopsis Genome / Agnieszka Żmieńko (WIiT), Malgorzata Marszalek-Zenczak, Paweł Wojciechowski (WIiT), Anna Samelak-Czajka, Magdalena Luczak, Piotr Kozlowski, Wojciech M. Karlowski, Marek Figlerowicz // Plant Cell - 2020, vol. 32, no. 6, p. 1797-1819

Scientific article 200.0 11.277

7.

Altered Levels of Proteins and Phosphoproteins, in the Absence of Early Causative Transcriptional Changes, Shape the Molecular Pathogenesis in the Brain of Young Presymptomatic Ki91 SCA3/MJD Mouse / Kalina Wiatr, Piotr Piasecki, Łukasz Marczak, Paweł Wojciechowski (WI), Małgorzata Kurkowiak, Rafał Płoski, Małgorzata Rydzanicz, Luiza Handschuh, Johannes Jungverdorben, Oliver Brüstle, Marek Figlerowicz, Maciej Figiel // Molecular Neurobiology - 2019, vol. 56, iss. 12, p. 8168-8202

Scientific article 100.0 4.500

8.

Identification of altered developmental pathways in human juvenile HD iPSC with 71Q and 109Q using transcriptome profiling / Karolina Świtońska, Wojciech Szlachcic, Luiza Handschuh, Paweł Wojciechowski (WI), Łukasz Marczak, Michał Stelmaszczuk, Marek Figlerowicz, Maciej Figiel // Frontiers in Cellular Neuroscience - 2019, vol. 12

Scientific article 100.0 3.921

9.

Graph algorithms for DNA sequencing - origins, current models and the future / Jacek Błażewicz (WI), Marta Kasprzak (WI), Michał Kierzynka, Wojciech Frohmberg (WI), Aleksandra Świercz (WI), Paweł Wojciechowski, Piotr Żurkowski (WI) // European Journal of Operational Research - 2018, vol. 264, iss. 3, p. 799-812

Scientific article 40.0 3.806

10.

GRASShopPER - An algorithm for de novo assembly based on GPU alignments / Aleksandra Świercz (WI), Wojciech Frohmberg (WI), Michel Kierzynka (WI), Paweł Wojciechowski (WI), Piotr Żurkowski (WI), Jan Badura (WI), Artur Laskowski (WI), Marta Kasprzak, Jacek Błażewicz (WI) // PLoS ONE - 2018, vol. 13, iss. 8, p. e0202355-1-e0202355-23

Scientific article 40.0 2.776

11.

NPM1 alternative transcripts are upregulated in acute myeloid and lymphoblastic leukemia and their expression level affects patient outcome / Luiza Handschuh, Paweł Wojciechowski (WI), Maciej Kaźmierczak, Małgorzata Marcinkowska-Swojak, Magdalena Łuczak (WTCH), Krzysztof Lewandowski, Mieczysław Komarnicki, Jacek Błażewicz (WI), Marek Figlerowicz, Piotr Kozłowski (WTCH) // Journal of Translational Medicine - 2018, vol. 16, iss. 1, p. 1-16

Scientific article 35.0 4.098

12.

G-MAPSEQ – a new method for mapping reads to a reference genome / Paweł Wojciechowski (WI), Wojciech Frohmberg (WI), Michał Kierzynka (WI), Piotr Żurkowski (WI), Jacek Błażewicz (WI) // Foundations of Computing and Decision Sciences - 2016, vol. 41, no. 2, p. 123-142

Scientific article 15.0

13.

Simultaneous detection of mutations and copy number variation of NPM1 in the acute myeloid leukemia using multiplex ligation-dependent probe amplification / Małgorzata Marcinkowska-Swojak, Luiza Handschuh, Paweł Wojciechowski (WI), Michał Góralski, Kamil Tomaszewski, Maciej Kaźmierczak, Krzysztof Lewandowski, Mieczysław Komarnicki, Jacek Błażewicz (WI), Marek Figlerowicz (WI), Piotr Kozłowski // Mutation Research : Fundamental and Molecular Mechanisms of Mutagenesis - 2016, vol. 786, p. 14-26

Scientific article 35.0 1.829

14.

Reference Alignment Based Methods for Quality Evaluation of Multiple Sequence Alignment - a Survey / Paweł Wojciechowski (WI), Piotr Formanowicz, Jacek Błażewicz (WI) // Current Bioinformatics - 2014, vol. 9, no. 1, p. 44-56

Scientific article 20.0 0.921

15.

DNA sequence assembly involving an acyclic graph model / Jacek Błażewicz (WI), Wojciech Frohmberg (WI), Piotr Gawron (WI), Marta Kasprzak (WI), Michał Kierzynka (WI), Aleksandra Świercz (WI), Paweł Wojciechowski (WI) // Foundations of Computing and Decision Sciences - 2013, Vol. 38, no. 1, p. 25-34

Scientific article 15.0

16.

G-DNA - a highly efficient multi-GPU/MPI tool for aligning nucleotide reads / Wojciech Frohmberg (WI), Michał Kierzynka, Jacek Błażewicz, Piotr Gawron (WI), Paweł Wojciechowski (WI) // Bulletin of the Polish Academy of Sciences. Technical Sciences - 2013, vol. 61, no. 4, p. 989-992

Scientific article 25.0 1.000

17.

G-MSA - A GPU-based, fast and accurate algorithm for multiple sequence alignment / Jacek Błażewicz, Wojciech Frohmberg (WI), Michał Kierzynka, Paweł Wojciechowski (WI) // Journal of Parallel and Distributed Computing - 2013, vol. 73, iss. 1, p. 32-41

Scientific article 30.0