SIS PUT | Mariusz Popenda

Scientific Information System of the Poznań University of Technology

PL EN

Main page / People / Mariusz Popenda

Person from outside the Poznań University of Technology

All publications All reports

Mariusz Popenda

Articles | Reports | Doctoral supervisor of doctoral dissertations

1.

Computational Pipeline for Reference-Free Comparative Analysis of RNA 3D Structures Applied to SARS-CoV-2 UTR Models / Julita Gumna, Maciej Antczak (WIiT), Ryszard W. Adamiak (WIiT), Janusz M. Bujnicki, Shi-Jie Chen, Feng Ding, Pritha Ghosh, Jun Li, Sunandan Mukherjee, Chandran Nithin, Katarzyna Pachulska-Wieczorek, Almudena Ponce-Salvatierra, Mariusz Popenda, Joanna Sarzyńska, Tomasz Wirecki, Dong Zhang, Sicheng Zhang, Tomasz Żok (WIiT), Eric Westhof, Zhichao Miao, Marta Szachniuk (WIiT), Agnieszka Rybarczyk (WIiT) // International Journal of Molecular Sciences - 2022, vol. 23, iss. 17, p. 9630-1-9630-20

Scientific article 140.0 6.208
2.

RNAspider: a webserver to analyze entanglements in RNA 3D structures / Kamil Luwański (WIiT), Vladyslav Hlushchenko (WIiT), Mariusz Popenda, Tomasz Żok (WIiT), Joanna Sarzyńska, Daniil Martsich (WIiT), Marta Szachniuk (WIiT), Maciej Antczak (WIiT) // Nucleic Acids Research - 2022, vol. 50, iss. W1, p. W663-W669

Scientific article 200.0 19.160
3.

A new molecular mechanism of RNA circularization and the microRNA sponge formation / Agnieszka Belter, Mariusz Popenda, Marcin Sajek, Tomasz Woźniak, Mirosława Z. Naskręt-Barciszewska, Marta Szachniuk (WIiT), Stefan Jurga, Jan Barciszewski // Journal of Biomolecular Structure and Dynamics - 2022, vol. 40, no. 7, p. 3038-3045

Scientific article 70.0
4.

Entanglements of structure elements revealed in RNA 3D models / Mariusz Popenda, Tomasz Żok (WIiT), Joanna Sarzyńska, Agnieszka Korpeta, Ryszard W. Adamiak, Maciej Antczak, Marta Szachniuk (WIiT) // Nucleic Acids Research - 2021, vol. 49, iss. 17, p. 9625-9632

Scientific article 200.0 19.160
5.

ElTetrado: a tool for identification and classification of tetrads and quadruplexes / Tomasz Żok (WIiT), Mariusz Popenda, Marta Szachniuk (WIiT) // BMC Bioinformatics - 2020, vol. 21, p. 40-1-40-7

Scientific article 100.0 3.169

All articles

1.

Modeling 3D structures of RNA nanoparticles / Marta Szachniuk (WIiT), Joanna Sarzyńska, Maciej Antczak (WIiT), Mariusz Popenda, Tomasz Żok (WIiT) // r3330_2022

Research report
2.

RNAspider: a webserver to analyze entanglements in RNA 3D structures / Kamil Luwański (WIiT), Vladyslav Hlushchenko (WIiT), Mariusz Popenda, Tomasz Żok (WIiT), Joanna Sarzyńska, Daniil Martsich (WIiT), Marta Szachniuk (WIiT), Maciej Antczak (WIiT) // r2894_2022

Research report
3.

Entanglements in RNA 3D structures / Marta Szachniuk (WIiT), Mariusz Popenda, Joanna Sarzyńska, Tomasz Żok (WIiT), Maciej Antczak (WIiT) // r2228_2021

Educational materials
4.

Entanglements of structure elements revealed in RNA 3D models / Mariusz Popenda, Tomasz Żok (WIiT), Joanna Sarzyńska, Agnieszka Korpeta, Ryszard W. Adamiak (WIiT), Maciej Antczak (WIiT), Marta Szachniuk (WIiT) // r1899_2021

Research report
5.

A new molecular mechanism of RNA circularization and the microRNA sponge formation / Agnieszka Belter, Mariusz Popenda, Marcin Sajek, Tomasz Woźniak, Miroslawa Z. Naskret-Barciszewska, Marta Szachniuk (WIiT), Stefan Jurga, Jan Barciszewski // r1417_2020

Research report

All reports

1.

Algorithmic Aspects of RNA Structure Similarity Analysis / Tomasz Żok (WI) / prom. Marta Szachniuk (WI), Mariusz Popenda, rev. Paweł Górecki, Małgorzata Kotulska - Poznań, Polska, 2018 - 188 s.

Dissertation

All dissertations

System created by Poznań University of Technology and Poznan Supercomputing and Networking Center

Scientific Information System of the Poznań University of Technology

Person from outside the Poznań University of Technology

Mariusz Popenda

Articles (22)

Reports (12)

Doctoral supervisor of doctoral dissertations (1)