GRASShopPER - An algorithm for de novo assembly based on GPU alignments

Aleksandra Świercz; Wojciech Frohmberg; Michel Kierzynka; Paweł Wojciechowski; Piotr Żurkowski; Jan Badura; Artur Laskowski; Marta Kasprzak; Jacek Błażewicz

doi:10.1371/journal.pone.0202355

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Title

GRASShopPER - An algorithm for de novo assembly based on GPU alignments

Authors

Aleksandra Świercz (WI) ^{[ 1 ][ 2.3 ][ P ]}
Wojciech Frohmberg (WI) ^{[ 1 ][ 2.3 ][ P ]}
Michel Kierzynka (WI) ^{[ 1 ]}
Paweł Wojciechowski (WI) ^{[ 1 ][ 2.3 ][ P ]}
Piotr Żurkowski (WI) ^{[ 1 ]}
Jan Badura (WI) ^{[ 1 ][ 2.3 ][ P ]}
Artur Laskowski (WI) ^{[ 1 ][ 2 ][ 2.3 ][ P ]}
Marta Kasprzak ^{[ 2.3 ][ P ]}
Jacek Błażewicz (WI) ^{[ 1 ][ 2.3 ][ P ]}

^{[ 1 ]} Instytut Informatyki, Wydział Informatyki, Politechnika Poznańska | ^{[ 2 ]} Europejskie Centrum Bioinformatyki i Genomiki | ^{[ P ]} employee

Scientific discipline (Law 2.0)

[2.3] Information and communication technology

Year of publication

2018

Published in

PLoS ONE

Journal year: 2018 | Journal volume: vol. 13 | Journal number: iss. 8

Article type

scientific article

Publication language

english

Pages (from - to)

e0202355-1 - e0202355-23

DOI

10.1371/journal.pone.0202355

Ministry points / journal

40.0

Ministry points / journal in years 2017-2021

40.0

Impact Factor

2.776

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