1.

RNA World Modeling: A Comparison of Two Complementary Approaches / Jarosław Synak (WIiT), Agnieszka Rybarczyk (WIiT), Jacek Błażewicz (WIiT) // Entropy - 2022, vol. 24, no. 4, p. 536-1-536-26

Scientific article 100.0 2.524

2.

Control of Cholesterol Metabolism Using a Systems Approach / Dorota Formanowicz, Marcin Radom (WIiT), Agnieszka Rybarczyk (WIiT), Krzysztof Tanaś (WIiT), Piotr Formanowicz (WIiT) // Biology - 2022, vol. 11, iss. 3, p. 430-1-430-33

Scientific article 100.0 5.079

3.

The itinerary of circulating miRNAs – implications for cancer progression and diagnosis / Przemysław Szałata, Anna-Maria Guner, Michalina Raczkowska, Julia Smyrek, Dominika Szaj, Katarzyna Samelak, Agnieszka Rybarczyk (WIiT), Tomasz P. Lehmann // Journal of Medical Science - 2021, vol. 90, no. 2, p. 97-110

Scientific article 20.0

4.

A Role of Inflammation and Immunity in Essential Hypertension - Modeled and Analyzed Using Petri Nets / Dorota Formanowicz, Agnieszka Rybarczyk (WIiT), Marcin Radom, Piotr Formanowicz (WIiT) // International Journal of Molecular Sciences - 2020, vol. 21, iss. 9, p. 3348-1-3348-34

Scientific article 140.0 5.924

5.

A Stochastic Petri Net-Based Model of the Involvement of Interleukin 18 in Atherosclerosis / Dorota Formanowicz, Agnieszka Rybarczyk (WIiT), Marcin Radom (WIiT), Krzysztof Tanaś, Piotr Formanowicz // International Journal of Molecular Sciences - 2020, vol. 21, iss. 22, p. 8574-1-8574-23

Scientific article 140.0 5.924

6.

Multi-agent approach to sequence structure simulation in the RNA World hypothesis / Jarosław Synak (WIiT), Agnieszka Rybarczyk (WIiT), Jacek Błażewicz (WIiT) // PLoS ONE - 2020, vol. 15, iss. 8, p. e0238253-1-e0238253-23

Scientific article 100.0 3.240

7.

RNAvista: a webserver to assess RNA secondary structures with non-canonical base pairs / Maciej Antczak (WI), Marcin Zabłocki (WI), Tomasz Żok (WI), Agnieszka Rybarczyk (WI), Jacek Błażewicz (WI), Marta Szachniuk (WI) // Bioinformatics - 2019, vol. 35, iss. 1, p. 152-155

Scientific article 200.0 5.610

8.

Factors Influencing Essential Hypertension and Cardiovascular Disease Modeled and Analyzed using Stochastic Petri Nets / Dorota Formanowicz, Agnieszka Rybarczyk (WI), Piotr Formanowicz (WI) // Fundamenta Informaticae - 2018, vol. 160, iss. 1-2, p. 143-165

Scientific article 20.0 1.204

9.

The role of Fenton reaction in ROS-induced toxicity underlying atherosclerosis - modeled and analyzed using a Petri net-based approach / Dorota Formanowicz, Marcin Radom (WI), Agnieszka Rybarczyk (WI), Piotr Formanowicz (WI) // BioSystems - 2018, vol. 165, p. 71-87

Scientific article 25.0 1.623

10.

Holmes: a graphical tool for development, simulation and analysis of Petri net based models of complex biological systems / Marcin Radom, Agnieszka Rybarczyk (WI), Bartłomiej Szawulak, Hubert Andrzejewski, Piotr Chabelski, Adam Kozak, Piotr Formanowicz (WI) // Bioinformatics - 2017, vol. 33, iss. 23, p. 3822-3823

Scientific article 45.0 5.481

11.

Modeling of the catalytic core of Arabidopsis thaliana Dicer-like 4 protein and its complex with double-stranded RNA / Agnieszka Mickiewicz, Joanna Sarzyńska, Maciej Miłostan (WI), Anna Kurzyńska-Kokorniak, Agnieszka Rybarczyk, Piotr Łukasiak (WI), Tadeusz Kuliński, Marek Figlerowicz, Jacek Błażewicz (WI) // Computational Biology and Chemistry - 2017, vol. 66, p. 44-56

Scientific article 25.0 1.412

12.

Tabu search for the RNA partial degradation problem / Agnieszka Rybarczyk (WI), Alain Hertz, Marta Kasprzak (WI), Jacek Błażewicz (WI) // International Journal of Applied Mathematics and Computer Science - 2017, vol. 27, no. 2, p. 401-415

Scientific article 25.0 1.694

13.

AmiRNA Designer - new method of artificial miRNA design / Agnieszka Mickiewicz, Agnieszka Rybarczyk, Joanna Sarzyńska, Marek Figlerowicz, Jacek Błażewicz (WI) // Acta Biochimica Polonica - 2016, vol. 63, no. 1, p. 71-77

Scientific article 15.0 1.159

14.

Computational prediction of non-enzymatic RNA degradation patterns / Agnieszka Rybarczyk (WI), Paulina Jackowiak, Marek Figlerowicz (WI), Jacek Błażewicz (WI) // Acta Biochimica Polonica - 2016, vol. 63, no. 4, p. 745-751

Scientific article 15.0 1.159

15.

RNA-Seq-based analysis of differential gene expression associated with hepatitis C virus infection in a cell culture / Anna Hojka-Osińska, Lucyna Budzko, Agnieszka Zmienko (WI), Agnieszka Rybarczyk (WI), Patrick Maillard, Agata Budkowska, Marek Figlerowicz, Paulina Jackowiak // Acta Biochimica Polonica - 2016, vol. 63, no. 4, p. 789-798

Scientific article 15.0 1.159

16.

New in silico approach to assessing RNA secondary structures with non-canonical base pairs / Agnieszka Rybarczyk, Natalia Szóstak, Maciej Antczak (WI), Tomasz Żok (WI), Mariusz Popenda, Ryszard Adamiak, Jacek Błażewicz (WI), Marta Szachniuk // BMC Bioinformatics - 2015, vol. 16, p. 276-1-276-12

Scientific article 35.0 2.435

17.

Sorting signal targeting mRNA into hepatic extracellular vesicles / Natalia Szóstak, Felix Royo, Agnieszka Rybarczyk (WI), Marta Szachniuk, Jacek Błażewicz, Antonio del Sol, Juan M. Falcon-Perez // RNA Biology - 2014, vol. 11, iss. 7, p. 836-844

Scientific article 35.0 4.974